Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891202.1_cds_XP_016445947.1_40854
CDS Infomation

[gene=LOC107771131] [db_xref=GeneID:107771131] [protein=pre-mRNA-splicing factor cwc25-like isoform X2] [protein_id=XP_016445947.1] [location=complement(join(15357..15500,15659..15727,16112..16206,18883..19032,19102..19962,23244..23379))] [gbkey=CDS]
Sequence

ATGGACTTAAATGGGAAAAGTTCACCGCAAGATAATGTTGATTCGAAGGGGGCATTCCGT
AAGCTCTCCAATGATGCAGCTAACAGGAAATACAGGCGTCGCTCTCCTGTTGGTGGTGGT
TCCTCATCGTCTGACGGGAGCCCTGCCCGCCAGAGGAGCTCTAGTCCTATCCCATCAAGG
AAGGATGAATGGCGACATAAGGATGATGATTTAGATAGGAATTCCAGTAGACAGGGTCGC
ATAGGTGAATCTCACAGGCAGTCTGATCGACAATCTTCTAGGAGTTCTCGCAGTCACCAC
AGGAACGAGGATTATTCCAGGCATGACAGGCATACTGATGATGATGATAGAGGATATTCA
AAGCTATCCTCTCATTCTCATCGTGACTCTAGAGTGAATGATTATTCTAATAACTCCAGG
CGAGATAATGATCATAGATCAAGAGTCTGCCCACGTGACATTGACAAACACTACCGAGGT
AGGTATGATGATTCAGGGCATAGAAGCAAGGACCGGGAGAGAGAAACTTCATCATTCAAA
GACAGAGATCCATCATTTGATAGAGTAGGATCAGGTAGGCGTTATAATAACTCTAGCATT
GACGATAGTAGATACAGGGAAAGGGATAGGTATAAGGAGTGTAGAGACAGCCGAGATGAG
AAGGGGGACCGTAGGAGCGATCACAAAAGTGATAATTTACCTGCTTATGAGGACTCTAGA
AGCAACCGAAATGAGTCAAATTCAAGAAAAGACAGTTCTAGGCATCGGCTGAAGGAAGCT
CCACAATTTGATGAAATGGTGTTGGATAGTGAGAAATACACTAAAGAGGAAAAGAAGAAA
TATGAAGACCGTGATCAGTACAAGGAGAGAAGCTACTACAGAGAAACAAAGGAGAAATTT
GAAGACAGAAATGTTGAGTTTGGTAAAGGGCGAGAGTCTCCAGCTAAGAAGTCAAAGTTC
TCAGGCATGGACCGGAGTTCAGAGCAGGGAATAGATGGTATGGATCCAGCAAGCGCGGTT
GATGGAAAACTTTCTTCGAGTTCAAAACAAGGTCAAGGTCCAAACAGTGAATTGGCCTTG
GAGCAGGGCGTGAAAGACTCTGATATAGATGCTGCAAAAGTTGCTGCAATGAAGGCTGCT
GAACTAGTTAATAGAAACCTTATTGGAACGGGTATCATGACTGCTGACCAAAAGAAGAAG
CTGCTGTGGGGAAACAAGAAAACCACCACTGATACTGAAGAGTCCACTCATCGTTGGGAT
ACATCACTATTTGGTGATCGCGAGCGACAAGAAAAATTCAAGAAACTCATGGGTGTGAAA
GGCGACGTGAAGACAGAGAACAAACCAGTCATCCACGACGCAGAGAAGCAAAGGGAGCTC
CAGATGGATTTGGAGAAGCAATATACTGCTGGACTTCGCCGAAGAGATGGCCGTACAGTT
GGACTAGGGCTCTAA

Peptide Sequence

PEP ID

XP_016445947.1
PEP Infomation

PREDICTED: pre-mRNA-splicing factor cwc25-like isoform X2 [Nicotiana tabacum]
Sequence

MDLNGKSSPQDNVDSKGAFRKLSNDAANRKYRRRSPVGGGSSSSDGSPARQRSSSPIPSR
KDEWRHKDDDLDRNSSRQGRIGESHRQSDRQSSRSSRSHHRNEDYSRHDRHTDDDDRGYS
KLSSHSHRDSRVNDYSNNSRRDNDHRSRVCPRDIDKHYRGRYDDSGHRSKDRERETSSFK
DRDPSFDRVGSGRRYNNSSIDDSRYRERDRYKECRDSRDEKGDRRSDHKSDNLPAYEDSR
SNRNESNSRKDSSRHRLKEAPQFDEMVLDSEKYTKEEKKKYEDRDQYKERSYYRETKEKF
EDRNVEFGKGRESPAKKSKFSGMDRSSEQGIDGMDPASAVDGKLSSSSKQGQGPNSELAL
EQGVKDSDIDAAKVAAMKAAELVNRNLIGTGIMTADQKKKLLWGNKKTTTDTEESTHRWD
TSLFGDRERQEKFKKLMGVKGDVKTENKPVIHDAEKQRELQMDLEKQYTAGLRRRDGRTV
GLGL

Transcript Sequence

Gene sequence data has not been registered.